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Description

Sometimes the work we have to perform is just too large for the machine we are on and it is useful to be able to login remotely to more powerful supercomputers. For example, some tasks (e.g., genome assembly) require immense amounts of working memory (i.e., RAM), while others require very powerful processors or excessive storage. For these tasks, the Minnesota Supercomputing Institute (MSI) has a variety of resources to tap, and these will be the topic of this course.

Prerequisites: GEMSx001.1 and GEMSx001.2 or equivalents

Note: GEMSx001.3 course is only for UMN affiliates with a standard UMN ID (x.500)

Outline

Remote login to the Minnesota Supercomputing Institute (MSI)
Customizing your remote experience
Scheduling jobs on MSI's queue
Data transfer to remote sites
  • Globus for high-speed data transfer
  • scp for quick command line copying
  • Command line utilities for bulk remote downloads
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